Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.75□□□□□ -0.37
Timp3P39876 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Gm4459-201ENSMUST00000118750 468 ntBASIC12.75□□□□□ -0.37
Timp3P39876 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Timp3P39876 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Timp3P39876 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.75□□□□□ -0.37
Timp3P39876 Mir6404-201ENSMUST00000183699 94 ntBASIC12.75□□□□□ -0.37
Timp3P39876 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.75□□□□□ -0.37
Timp3P39876 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.75□□□□□ -0.37
Timp3P39876 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Timp3P39876 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Timp3P39876 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.75□□□□□ -0.37
Timp3P39876 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Timp3P39876 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Timp3P39876 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Timp3P39876 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Asic1-205ENSMUST00000228185 1818 ntBASIC12.74□□□□□ -0.37
Timp3P39876 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Timp3P39876 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Gm1401-201ENSMUST00000122048 772 ntBASIC12.74□□□□□ -0.37
Timp3P39876 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.74□□□□□ -0.37
Timp3P39876 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.74□□□□□ -0.37
Timp3P39876 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.74□□□□□ -0.37
Timp3P39876 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.74□□□□□ -0.37
Timp3P39876 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.74□□□□□ -0.37
Timp3P39876 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Timp3P39876 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Timp3P39876 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.73□□□□□ -0.37
Timp3P39876 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Timp3P39876 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.73□□□□□ -0.37
Timp3P39876 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.73□□□□□ -0.37
Timp3P39876 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Timp3P39876 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Gm13418-201ENSMUST00000119097 944 ntBASIC12.73□□□□□ -0.37
Timp3P39876 Gm12350-201ENSMUST00000121208 462 ntBASIC12.73□□□□□ -0.37
Timp3P39876 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Timp3P39876 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.73□□□□□ -0.37
Timp3P39876 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Timp3P39876 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Mir5126-201ENSMUST00000175513 77 ntBASIC12.73□□□□□ -0.37
Timp3P39876 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.73□□□□□ -0.37
Timp3P39876 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Timp3P39876 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms