Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HmgclP38060 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.34■□□□□ 0.05
HmgclP38060 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HmgclP38060 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HmgclP38060 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
HmgclP38060 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HmgclP38060 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HmgclP38060 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.33■□□□□ 0.05
HmgclP38060 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HmgclP38060 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HmgclP38060 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HmgclP38060 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HmgclP38060 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 Gm13418-201ENSMUST00000119097 944 ntBASIC15.33■□□□□ 0.04
HmgclP38060 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HmgclP38060 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.33■□□□□ 0.04
HmgclP38060 Gm27646-201ENSMUST00000183989 110 ntBASIC15.33■□□□□ 0.04
HmgclP38060 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.33■□□□□ 0.04
HmgclP38060 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HmgclP38060 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
HmgclP38060 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HmgclP38060 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
HmgclP38060 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.33■□□□□ 0.04
HmgclP38060 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HmgclP38060 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HmgclP38060 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HmgclP38060 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.32■□□□□ 0.04
HmgclP38060 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HmgclP38060 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.32■□□□□ 0.04
HmgclP38060 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.32■□□□□ 0.04
HmgclP38060 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.32■□□□□ 0.04
HmgclP38060 Rps4l-201ENSMUST00000071745 943 ntBASIC15.32■□□□□ 0.04
HmgclP38060 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HmgclP38060 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HmgclP38060 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
HmgclP38060 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.31■□□□□ 0.04
HmgclP38060 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HmgclP38060 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.31■□□□□ 0.04
HmgclP38060 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.31■□□□□ 0.04
HmgclP38060 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.31■□□□□ 0.04
HmgclP38060 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
HmgclP38060 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.31■□□□□ 0.04
HmgclP38060 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
HmgclP38060 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HmgclP38060 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Gm25990-201ENSMUST00000102440 86 ntBASIC15.3■□□□□ 0.04
HmgclP38060 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.3■□□□□ 0.04
HmgclP38060 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.3■□□□□ 0.04
HmgclP38060 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.3■□□□□ 0.04
HmgclP38060 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.3■□□□□ 0.04
HmgclP38060 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.3■□□□□ 0.04
HmgclP38060 Gm6089-201ENSMUST00000197666 938 ntBASIC15.3■□□□□ 0.04
HmgclP38060 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HmgclP38060 Gm6376-201ENSMUST00000209407 580 ntBASIC15.3■□□□□ 0.04
HmgclP38060 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.3■□□□□ 0.04
HmgclP38060 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 209 ms