Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccl6P27784 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccl6P27784 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Ccl6P27784 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccl6P27784 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ccl6P27784 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccl6P27784 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccl6P27784 Gm27867-201ENSMUST00000184778 125 ntBASIC12.16□□□□□ -0.46
Ccl6P27784 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccl6P27784 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccl6P27784 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccl6P27784 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccl6P27784 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccl6P27784 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl6P27784 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Mir6404-201ENSMUST00000183699 94 ntBASIC12.15□□□□□ -0.46
Ccl6P27784 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccl6P27784 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.15□□□□□ -0.46
Ccl6P27784 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.15□□□□□ -0.46
Ccl6P27784 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccl6P27784 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccl6P27784 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccl6P27784 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccl6P27784 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ccl6P27784 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccl6P27784 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccl6P27784 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccl6P27784 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccl6P27784 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccl6P27784 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.14□□□□□ -0.47
Ccl6P27784 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.14□□□□□ -0.47
Ccl6P27784 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.14□□□□□ -0.47
Ccl6P27784 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccl6P27784 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccl6P27784 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccl6P27784 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms