Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cd40lgP27548 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cd40lgP27548 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cd40lgP27548 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.34□□□□□ -0.11
Cd40lgP27548 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.34□□□□□ -0.11
Cd40lgP27548 Gm34391-201ENSMUST00000203706 907 ntBASIC14.34□□□□□ -0.11
Cd40lgP27548 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cd40lgP27548 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cd40lgP27548 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cd40lgP27548 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.34□□□□□ -0.11
Cd40lgP27548 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd40lgP27548 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd40lgP27548 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd40lgP27548 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd40lgP27548 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cd40lgP27548 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.33□□□□□ -0.11
Cd40lgP27548 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cd40lgP27548 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.33□□□□□ -0.12
Cd40lgP27548 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.33□□□□□ -0.12
Cd40lgP27548 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cd40lgP27548 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cd40lgP27548 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cd40lgP27548 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cd40lgP27548 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cd40lgP27548 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cd40lgP27548 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Cd40lgP27548 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cd40lgP27548 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cd40lgP27548 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.32□□□□□ -0.12
Cd40lgP27548 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.32□□□□□ -0.12
Cd40lgP27548 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.32□□□□□ -0.12
Cd40lgP27548 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.32□□□□□ -0.12
Cd40lgP27548 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.32□□□□□ -0.12
Cd40lgP27548 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cd40lgP27548 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd40lgP27548 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd40lgP27548 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cd40lgP27548 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.31□□□□□ -0.12
Cd40lgP27548 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms