Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NeflP08551 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NeflP08551 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NeflP08551 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC20.28■□□□□ 0.84
NeflP08551 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC20.28■□□□□ 0.84
NeflP08551 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NeflP08551 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.28■□□□□ 0.84
NeflP08551 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.28■□□□□ 0.84
NeflP08551 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NeflP08551 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NeflP08551 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NeflP08551 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NeflP08551 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NeflP08551 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NeflP08551 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
NeflP08551 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NeflP08551 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.27■□□□□ 0.84
NeflP08551 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NeflP08551 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.27■□□□□ 0.84
NeflP08551 Tfap2a-203ENSMUST00000223869 2037 ntBASIC20.27■□□□□ 0.84
NeflP08551 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NeflP08551 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NeflP08551 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC20.27■□□□□ 0.84
NeflP08551 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NeflP08551 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NeflP08551 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NeflP08551 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NeflP08551 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
NeflP08551 Gm27389-201ENSMUST00000183622 195 ntBASIC20.27■□□□□ 0.84
NeflP08551 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.27■□□□□ 0.84
NeflP08551 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NeflP08551 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NeflP08551 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
NeflP08551 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
NeflP08551 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NeflP08551 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
NeflP08551 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.83
NeflP08551 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NeflP08551 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NeflP08551 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NeflP08551 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.26■□□□□ 0.83
NeflP08551 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.26■□□□□ 0.83
NeflP08551 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.26■□□□□ 0.83
NeflP08551 Gm44430-201ENSMUST00000203376 995 ntBASIC20.26■□□□□ 0.83
NeflP08551 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NeflP08551 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NeflP08551 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NeflP08551 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NeflP08551 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NeflP08551 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NeflP08551 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NeflP08551 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NeflP08551 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NeflP08551 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.25■□□□□ 0.83
NeflP08551 Gm18959-201ENSMUST00000208954 655 ntBASIC20.25■□□□□ 0.83
NeflP08551 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NeflP08551 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NeflP08551 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NeflP08551 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC20.24■□□□□ 0.83
NeflP08551 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 Gm13559-201ENSMUST00000120476 863 ntBASIC20.24■□□□□ 0.83
NeflP08551 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.24■□□□□ 0.83
NeflP08551 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NeflP08551 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NeflP08551 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NeflP08551 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.23■□□□□ 0.83
NeflP08551 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Gm37722-201ENSMUST00000193757 208 ntBASIC20.23■□□□□ 0.83
NeflP08551 Gm45058-201ENSMUST00000205810 766 ntBASIC20.23■□□□□ 0.83
NeflP08551 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NeflP08551 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms