Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vti1aO89116 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vti1aO89116 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vti1aO89116 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.77■□□□□ 0.28
Vti1aO89116 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vti1aO89116 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Vti1aO89116 Mir6404-201ENSMUST00000183699 94 ntBASIC16.77■□□□□ 0.28
Vti1aO89116 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.77■□□□□ 0.28
Vti1aO89116 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.77■□□□□ 0.28
Vti1aO89116 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vti1aO89116 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vti1aO89116 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Vti1aO89116 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Vti1aO89116 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vti1aO89116 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vti1aO89116 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vti1aO89116 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vti1aO89116 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vti1aO89116 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Vti1aO89116 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.77■□□□□ 0.27
Vti1aO89116 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vti1aO89116 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vti1aO89116 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.76■□□□□ 0.27
Vti1aO89116 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.76■□□□□ 0.27
Vti1aO89116 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Vti1aO89116 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Vti1aO89116 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Vti1aO89116 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vti1aO89116 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Gm23935-201ENSMUST00000102303 57 ntBASIC16.75■□□□□ 0.27
Vti1aO89116 Gm24270-201ENSMUST00000102326 57 ntBASIC16.75■□□□□ 0.27
Vti1aO89116 Gm24245-201ENSMUST00000157318 57 ntBASIC16.75■□□□□ 0.27
Vti1aO89116 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.75■□□□□ 0.27
Vti1aO89116 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vti1aO89116 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Vti1aO89116 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.74■□□□□ 0.27
Vti1aO89116 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.74■□□□□ 0.27
Vti1aO89116 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.74■□□□□ 0.27
Vti1aO89116 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.74■□□□□ 0.27
Vti1aO89116 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.74■□□□□ 0.27
Vti1aO89116 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Vti1aO89116 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vti1aO89116 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.73■□□□□ 0.27
Vti1aO89116 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vti1aO89116 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vti1aO89116 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vti1aO89116 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms