Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sp1O89090 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.69■□□□□ 0.1
Sp1O89090 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.69■□□□□ 0.1
Sp1O89090 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 App-207ENSMUST00000227737 2827 ntBASIC15.69■□□□□ 0.1
Sp1O89090 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sp1O89090 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Sp1O89090 Mir8117-201ENSMUST00000184773 107 ntBASIC15.69■□□□□ 0.1
Sp1O89090 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Gm5867-201ENSMUST00000063197 592 ntBASIC15.69■□□□□ 0.1
Sp1O89090 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.69■□□□□ 0.1
Sp1O89090 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Sp1O89090 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sp1O89090 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.68■□□□□ 0.1
Sp1O89090 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.68■□□□□ 0.1
Sp1O89090 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.68■□□□□ 0.1
Sp1O89090 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sp1O89090 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.68■□□□□ 0.1
Sp1O89090 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.68■□□□□ 0.1
Sp1O89090 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.68■□□□□ 0.1
Sp1O89090 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.68■□□□□ 0.1
Sp1O89090 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.68■□□□□ 0.1
Sp1O89090 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.68■□□□□ 0.1
Sp1O89090 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.68■□□□□ 0.1
Sp1O89090 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sp1O89090 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Sp1O89090 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.67■□□□□ 0.1
Sp1O89090 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.67■□□□□ 0.1
Sp1O89090 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.67■□□□□ 0.1
Sp1O89090 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.67■□□□□ 0.1
Sp1O89090 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Gm18246-201ENSMUST00000221023 728 ntBASIC15.67■□□□□ 0.1
Sp1O89090 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.67■□□□□ 0.1
Sp1O89090 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.67■□□□□ 0.1
Sp1O89090 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Sp1O89090 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sp1O89090 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sp1O89090 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.66■□□□□ 0.1
Sp1O89090 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.66■□□□□ 0.1
Sp1O89090 Gm25911-201ENSMUST00000157621 56 ntBASIC15.66■□□□□ 0.1
Sp1O89090 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Sp1O89090 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Gm2213-201ENSMUST00000197485 688 ntBASIC15.66■□□□□ 0.1
Sp1O89090 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sp1O89090 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Sp1O89090 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sp1O89090 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.66■□□□□ 0.1
Sp1O89090 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sp1O89090 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sp1O89090 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.65■□□□□ 0.1
Sp1O89090 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.65■□□□□ 0.1
Sp1O89090 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sp1O89090 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms