Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cops6O88545 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Cops6O88545 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.93■□□□□ 0.62
Cops6O88545 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.93■□□□□ 0.62
Cops6O88545 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.93■□□□□ 0.62
Cops6O88545 Gm16198-201ENSMUST00000118766 670 ntBASIC18.93■□□□□ 0.62
Cops6O88545 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cops6O88545 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.93■□□□□ 0.62
Cops6O88545 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cops6O88545 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.93■□□□□ 0.62
Cops6O88545 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cops6O88545 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.93■□□□□ 0.62
Cops6O88545 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops6O88545 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cops6O88545 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops6O88545 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Cops6O88545 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops6O88545 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops6O88545 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops6O88545 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.92■□□□□ 0.62
Cops6O88545 Gm11745-201ENSMUST00000121669 448 ntBASIC18.92■□□□□ 0.62
Cops6O88545 Rpph1-201ENSMUST00000175096 319 ntBASIC18.92■□□□□ 0.62
Cops6O88545 Gm44335-201ENSMUST00000196879 141 ntBASIC18.92■□□□□ 0.62
Cops6O88545 Gm44297-201ENSMUST00000198304 141 ntBASIC18.92■□□□□ 0.62
Cops6O88545 Gm44346-201ENSMUST00000198851 141 ntBASIC18.92■□□□□ 0.62
Cops6O88545 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cops6O88545 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops6O88545 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.92■□□□□ 0.62
Cops6O88545 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops6O88545 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cops6O88545 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops6O88545 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.92■□□□□ 0.62
Cops6O88545 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops6O88545 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cops6O88545 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.91■□□□□ 0.62
Cops6O88545 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cops6O88545 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.91■□□□□ 0.62
Cops6O88545 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Cops6O88545 Gm10576-201ENSMUST00000191927 825 ntBASIC18.91■□□□□ 0.62
Cops6O88545 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.91■□□□□ 0.62
Cops6O88545 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.91■□□□□ 0.62
Cops6O88545 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.91■□□□□ 0.62
Cops6O88545 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops6O88545 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.9■□□□□ 0.62
Cops6O88545 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cops6O88545 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.9■□□□□ 0.62
Cops6O88545 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.9■□□□□ 0.62
Cops6O88545 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.9■□□□□ 0.62
Cops6O88545 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cops6O88545 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cops6O88545 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cops6O88545 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cops6O88545 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cops6O88545 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Cops6O88545 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cops6O88545 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cops6O88545 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms