Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Vti1bO88384 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.88□□□□□ -0.03
Vti1bO88384 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vti1bO88384 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vti1bO88384 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vti1bO88384 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.87□□□□□ -0.03
Vti1bO88384 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vti1bO88384 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vti1bO88384 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Gm10052-201ENSMUST00000168019 960 ntBASIC14.86□□□□□ -0.03
Vti1bO88384 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.86□□□□□ -0.03
Vti1bO88384 Gm44430-201ENSMUST00000203376 995 ntBASIC14.86□□□□□ -0.03
Vti1bO88384 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.86□□□□□ -0.03
Vti1bO88384 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.86□□□□□ -0.03
Vti1bO88384 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.86□□□□□ -0.03
Vti1bO88384 Gm7729-201ENSMUST00000050143 801 ntBASIC14.86□□□□□ -0.03
Vti1bO88384 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.86□□□□□ -0.03
Vti1bO88384 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vti1bO88384 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1bO88384 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Vti1bO88384 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Vti1bO88384 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vti1bO88384 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Vti1bO88384 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vti1bO88384 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Vti1bO88384 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.85□□□□□ -0.03
Vti1bO88384 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.85□□□□□ -0.03
Vti1bO88384 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.85□□□□□ -0.03
Vti1bO88384 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Vti1bO88384 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.85□□□□□ -0.03
Vti1bO88384 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vti1bO88384 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.85□□□□□ -0.03
Vti1bO88384 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1bO88384 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.85□□□□□ -0.03
Vti1bO88384 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vti1bO88384 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.84□□□□□ -0.03
Vti1bO88384 Gm15794-201ENSMUST00000120182 631 ntBASIC14.84□□□□□ -0.03
Vti1bO88384 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Gm27704-201ENSMUST00000185094 107 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms