Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a4O88343 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.33■□□□□ 0.53
Slc4a4O88343 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 App-207ENSMUST00000227737 2827 ntBASIC18.33■□□□□ 0.53
Slc4a4O88343 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a4O88343 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Slc4a4O88343 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.33■□□□□ 0.52
Slc4a4O88343 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.33■□□□□ 0.52
Slc4a4O88343 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a4O88343 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.33■□□□□ 0.52
Slc4a4O88343 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
Slc4a4O88343 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a4O88343 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a4O88343 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Slc4a4O88343 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a4O88343 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a4O88343 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a4O88343 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Slc4a4O88343 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc4a4O88343 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.32■□□□□ 0.52
Slc4a4O88343 Gm11779-201ENSMUST00000118541 368 ntBASIC18.32■□□□□ 0.52
Slc4a4O88343 Gm12260-201ENSMUST00000122447 411 ntBASIC18.32■□□□□ 0.52
Slc4a4O88343 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Gm7787-201ENSMUST00000216858 688 ntBASIC18.32■□□□□ 0.52
Slc4a4O88343 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.32■□□□□ 0.52
Slc4a4O88343 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Slc4a4O88343 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a4O88343 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slc4a4O88343 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.32■□□□□ 0.52
Slc4a4O88343 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc4a4O88343 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc4a4O88343 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Slc4a4O88343 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc4a4O88343 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc4a4O88343 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.31■□□□□ 0.52
Slc4a4O88343 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc4a4O88343 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc4a4O88343 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc4a4O88343 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.3■□□□□ 0.52
Slc4a4O88343 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.3■□□□□ 0.52
Slc4a4O88343 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc4a4O88343 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc4a4O88343 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Slc4a4O88343 Gm14722-201ENSMUST00000118943 689 ntBASIC18.3■□□□□ 0.52
Slc4a4O88343 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc4a4O88343 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Slc4a4O88343 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.3■□□□□ 0.52
Slc4a4O88343 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.3■□□□□ 0.52
Slc4a4O88343 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc4a4O88343 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms