Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.2■□□□□ 0.18
Ttc3O88196 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ttc3O88196 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Ttc3O88196 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ttc3O88196 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ttc3O88196 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.2■□□□□ 0.18
Ttc3O88196 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.2■□□□□ 0.18
Ttc3O88196 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Gm43474-201ENSMUST00000196415 774 ntBASIC16.2■□□□□ 0.18
Ttc3O88196 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.2■□□□□ 0.18
Ttc3O88196 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.2■□□□□ 0.18
Ttc3O88196 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.2■□□□□ 0.18
Ttc3O88196 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ttc3O88196 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ttc3O88196 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ttc3O88196 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Ttc3O88196 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Mir6956-201ENSMUST00000183598 62 ntBASIC16.19■□□□□ 0.18
Ttc3O88196 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Ttc3O88196 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ttc3O88196 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ttc3O88196 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.18■□□□□ 0.18
Ttc3O88196 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.18■□□□□ 0.18
Ttc3O88196 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.18■□□□□ 0.18
Ttc3O88196 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Rprl2-201ENSMUST00000157150 290 ntBASIC16.18■□□□□ 0.18
Ttc3O88196 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.18■□□□□ 0.18
Ttc3O88196 Gm44872-201ENSMUST00000207864 420 ntBASIC16.18■□□□□ 0.18
Ttc3O88196 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Gm10576-201ENSMUST00000191927 825 ntBASIC16.18■□□□□ 0.18
Ttc3O88196 Gm2272-201ENSMUST00000194903 582 ntBASIC16.18■□□□□ 0.18
Ttc3O88196 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.18■□□□□ 0.18
Ttc3O88196 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Ttc3O88196 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ttc3O88196 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.17■□□□□ 0.18
Ttc3O88196 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.17■□□□□ 0.18
Ttc3O88196 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Ttc3O88196 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.17■□□□□ 0.18
Ttc3O88196 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.17■□□□□ 0.18
Ttc3O88196 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Ttc3O88196 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ttc3O88196 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ttc3O88196 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.17■□□□□ 0.18
Ttc3O88196 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Ttc3O88196 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ttc3O88196 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms