Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Smarce1O54941 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarce1O54941 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smarce1O54941 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Smarce1O54941 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarce1O54941 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smarce1O54941 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarce1O54941 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarce1O54941 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smarce1O54941 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.51■□□□□ 0.55
Smarce1O54941 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.51■□□□□ 0.55
Smarce1O54941 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.51■□□□□ 0.55
Smarce1O54941 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Smarce1O54941 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Smarce1O54941 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.51■□□□□ 0.55
Smarce1O54941 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smarce1O54941 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.51■□□□□ 0.55
Smarce1O54941 Gm25016-201ENSMUST00000158399 131 ntBASIC18.51■□□□□ 0.55
Smarce1O54941 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smarce1O54941 Gm6345-202ENSMUST00000180900 204 ntBASIC18.51■□□□□ 0.55
Smarce1O54941 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarce1O54941 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smarce1O54941 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.5■□□□□ 0.55
Smarce1O54941 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.5■□□□□ 0.55
Smarce1O54941 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Smarce1O54941 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Smarce1O54941 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.5■□□□□ 0.55
Smarce1O54941 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.5■□□□□ 0.55
Smarce1O54941 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smarce1O54941 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarce1O54941 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Smarce1O54941 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smarce1O54941 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Smarce1O54941 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Smarce1O54941 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Gm10231-201ENSMUST00000181584 441 ntBASIC18.49■□□□□ 0.55
Smarce1O54941 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smarce1O54941 Gm10175-202ENSMUST00000208752 441 ntBASIC18.49■□□□□ 0.55
Smarce1O54941 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.49■□□□□ 0.55
Smarce1O54941 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smarce1O54941 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Smarce1O54941 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarce1O54941 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smarce1O54941 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smarce1O54941 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smarce1O54941 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarce1O54941 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms