Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm4535-201ENSMUST00000182274 558 ntBASIC14.64□□□□□ -0.07
Cx3cl1O35188 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.64□□□□□ -0.07
Cx3cl1O35188 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.64□□□□□ -0.07
Cx3cl1O35188 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.64□□□□□ -0.07
Cx3cl1O35188 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Gm10355-201ENSMUST00000097146 517 ntBASIC14.64□□□□□ -0.07
Cx3cl1O35188 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Cx3cl1O35188 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.63□□□□□ -0.07
Cx3cl1O35188 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.63□□□□□ -0.07
Cx3cl1O35188 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.63□□□□□ -0.07
Cx3cl1O35188 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.63□□□□□ -0.07
Cx3cl1O35188 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.63□□□□□ -0.07
Cx3cl1O35188 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.63□□□□□ -0.07
Cx3cl1O35188 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cx3cl1O35188 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Sybu-209ENSMUST00000228639 4113 ntBASIC14.62□□□□□ -0.07
Cx3cl1O35188 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.62□□□□□ -0.07
Cx3cl1O35188 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.62□□□□□ -0.07
Cx3cl1O35188 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.62□□□□□ -0.07
Cx3cl1O35188 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cl1O35188 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Gm13418-201ENSMUST00000119097 944 ntBASIC14.61□□□□□ -0.07
Cx3cl1O35188 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.61□□□□□ -0.07
Cx3cl1O35188 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cl1O35188 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.6□□□□□ -0.07
Cx3cl1O35188 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cl1O35188 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cl1O35188 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms