Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ebf3O08791 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.15■□□□□ 0.18
Ebf3O08791 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ebf3O08791 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.15■□□□□ 0.18
Ebf3O08791 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.15■□□□□ 0.18
Ebf3O08791 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.15■□□□□ 0.18
Ebf3O08791 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
Ebf3O08791 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.15■□□□□ 0.18
Ebf3O08791 Mir3113-201ENSMUST00000175478 76 ntBASIC16.15■□□□□ 0.18
Ebf3O08791 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.15■□□□□ 0.18
Ebf3O08791 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.15■□□□□ 0.18
Ebf3O08791 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf3O08791 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ebf3O08791 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ebf3O08791 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Ebf3O08791 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.14■□□□□ 0.17
Ebf3O08791 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Gm11764-201ENSMUST00000120221 623 ntBASIC16.14■□□□□ 0.17
Ebf3O08791 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ebf3O08791 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ebf3O08791 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.14■□□□□ 0.17
Ebf3O08791 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.14■□□□□ 0.17
Ebf3O08791 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.14■□□□□ 0.17
Ebf3O08791 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
Ebf3O08791 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.14■□□□□ 0.17
Ebf3O08791 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ebf3O08791 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf3O08791 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ebf3O08791 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ebf3O08791 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.13■□□□□ 0.17
Ebf3O08791 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.13■□□□□ 0.17
Ebf3O08791 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.13■□□□□ 0.17
Ebf3O08791 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.13■□□□□ 0.17
Ebf3O08791 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.13■□□□□ 0.17
Ebf3O08791 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf3O08791 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ebf3O08791 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.12■□□□□ 0.17
Ebf3O08791 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Ebf3O08791 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.12■□□□□ 0.17
Ebf3O08791 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf3O08791 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.12■□□□□ 0.17
Ebf3O08791 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms