Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Gm24543-201ENSMUST00000103867 82 ntBASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Gm43703-201ENSMUST00000200523 763 ntBASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Gm8062-201ENSMUST00000139696 444 ntBASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Gm9522-201ENSMUST00000182394 926 ntBASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc188F6WEU2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Gm16026-204ENSMUST00000162652 683 ntBASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Gm27920-201ENSMUST00000183953 96 ntBASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc188F6WEU2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Gm9002-201ENSMUST00000178437 499 ntBASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Mir6392-201ENSMUST00000184924 108 ntBASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc188F6WEU2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc188F6WEU2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc188F6WEU2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc188F6WEU2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc188F6WEU2 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.58■□□□□ 0.08
Ccdc188F6WEU2 Mir1897-201ENSMUST00000122581 272 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms