Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm1E9Q9Q2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm1E9Q9Q2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Gm37153-201ENSMUST00000193637 231 ntBASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Gm17968-201ENSMUST00000194902 784 ntBASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm1E9Q9Q2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
R3hdm1E9Q9Q2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
R3hdm1E9Q9Q2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
R3hdm1E9Q9Q2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
R3hdm1E9Q9Q2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
R3hdm1E9Q9Q2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms