Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Gm37748-201ENSMUST00000194379 1140 ntBASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scaf11E9PZM7 Haglr-201ENSMUST00000100000 2085 ntBASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Gm15483-201ENSMUST00000120338 456 ntBASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC21.48■■□□□ 1.03
Scaf11E9PZM7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scaf11E9PZM7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Gm29667-201ENSMUST00000190817 490 ntBASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Gm38319-201ENSMUST00000194537 1266 ntBASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scaf11E9PZM7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Gm11478-201ENSMUST00000117851 599 ntBASIC21.46■■□□□ 1.03
Scaf11E9PZM7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scaf11E9PZM7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.46■■□□□ 1.03
Scaf11E9PZM7 Gm16026-204ENSMUST00000162652 683 ntBASIC21.45■■□□□ 1.03
Scaf11E9PZM7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Scaf11E9PZM7 Gm8602-201ENSMUST00000184045 607 ntBASIC21.45■■□□□ 1.03
Scaf11E9PZM7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Scaf11E9PZM7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC21.45■■□□□ 1.03
Scaf11E9PZM7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Gm6263-201ENSMUST00000120029 1342 ntBASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scaf11E9PZM7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Gm43630-201ENSMUST00000201550 776 ntBASIC21.45■■□□□ 1.02
Scaf11E9PZM7 AC155729.1-201ENSMUST00000227758 544 ntBASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scaf11E9PZM7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scaf11E9PZM7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scaf11E9PZM7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scaf11E9PZM7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scaf11E9PZM7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scaf11E9PZM7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scaf11E9PZM7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scaf11E9PZM7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scaf11E9PZM7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms