Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hfm1D3Z4R1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hfm1D3Z4R1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hfm1D3Z4R1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hfm1D3Z4R1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hfm1D3Z4R1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Gm28265-201ENSMUST00000188201 2319 ntBASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Gm6539-201ENSMUST00000119157 1064 ntBASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 CT009510.1-201ENSMUST00000227972 270 ntBASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Hfm1D3Z4R1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 Gm42466-201ENSMUST00000202099 1301 ntBASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Hfm1D3Z4R1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 AC132467.2-202ENSMUST00000227726 559 ntBASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hfm1D3Z4R1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hfm1D3Z4R1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hfm1D3Z4R1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hfm1D3Z4R1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hfm1D3Z4R1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hfm1D3Z4R1 Gm7556-201ENSMUST00000201178 1084 ntBASIC21.58■■□□□ 1.05
Hfm1D3Z4R1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Hfm1D3Z4R1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hfm1D3Z4R1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Hfm1D3Z4R1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Hfm1D3Z4R1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Hfm1D3Z4R1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Hfm1D3Z4R1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC21.57■■□□□ 1.04
Hfm1D3Z4R1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC21.57■■□□□ 1.04
Hfm1D3Z4R1 AL593843.1-201ENSMUST00000195891 145 ntBASIC21.57■■□□□ 1.04
Hfm1D3Z4R1 AC158529.1-201ENSMUST00000223618 239 ntBASIC21.57■■□□□ 1.04
Hfm1D3Z4R1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms