Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.92□□□□□ -0.18
Shank1D3YZU1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.91□□□□□ -0.18
Shank1D3YZU1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.91□□□□□ -0.18
Shank1D3YZU1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.91□□□□□ -0.18
Shank1D3YZU1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shank1D3YZU1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gm13223-201ENSMUST00000118609 747 ntBASIC13.9□□□□□ -0.18
Shank1D3YZU1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gm18889-201ENSMUST00000174284 929 ntBASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gm22175-201ENSMUST00000175007 78 ntBASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shank1D3YZU1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Shank1D3YZU1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Shank1D3YZU1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Shank1D3YZU1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.89□□□□□ -0.19
Shank1D3YZU1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Gm7774-201ENSMUST00000200064 533 ntBASIC13.89□□□□□ -0.19
Shank1D3YZU1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Gm2423-201ENSMUST00000074863 733 ntBASIC13.89□□□□□ -0.19
Shank1D3YZU1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms