Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Gm11764-201ENSMUST00000120221 623 ntBASIC18.17■□□□□ 0.5
Usp42B2RQC2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.16■□□□□ 0.5
Usp42B2RQC2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Mir5131-201ENSMUST00000175426 93 ntBASIC18.16■□□□□ 0.5
Usp42B2RQC2 Gm18195-201ENSMUST00000207604 706 ntBASIC18.16■□□□□ 0.5
Usp42B2RQC2 AV026068-213ENSMUST00000223675 1171 ntBASIC18.16■□□□□ 0.5
Usp42B2RQC2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp42B2RQC2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Gm18489-201ENSMUST00000172565 551 ntBASIC18.15■□□□□ 0.5
Usp42B2RQC2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp42B2RQC2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.15■□□□□ 0.5
Usp42B2RQC2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.15■□□□□ 0.5
Usp42B2RQC2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Usp42B2RQC2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Usp42B2RQC2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp42B2RQC2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Usp42B2RQC2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.14■□□□□ 0.49
Usp42B2RQC2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.14■□□□□ 0.49
Usp42B2RQC2 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.14■□□□□ 0.49
Usp42B2RQC2 Mzt1-203ENSMUST00000227948 952 ntBASIC18.14■□□□□ 0.49
Usp42B2RQC2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Usp42B2RQC2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.13■□□□□ 0.49
Usp42B2RQC2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms