Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-1A0N8R0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav12d-1A0N8R0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-1A0N8R0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Gm22697-201ENSMUST00000175194 63 ntBASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms