Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv29A0A0G2LB96 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Gm7367-201ENSMUST00000057611 492 ntBASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv29A0A0G2LB96 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Gm18032-201ENSMUST00000222541 538 ntBASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv29A0A0G2LB96 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv29A0A0G2LB96 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms