Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trbv30A0A0B4J1P1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm34391-201ENSMUST00000203706 907 ntBASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.73□□□□□ -0.53
Trbv30A0A0B4J1P1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm8097-201ENSMUST00000117903 829 ntBASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm18622-201ENSMUST00000219361 595 ntBASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms