Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-42A0A0A6YY38 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.34□□□□□ -0.11
Ighv1-42A0A0A6YY38 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ighv1-42A0A0A6YY38 Dancr-204ENSMUST00000132389 2347 ntBASIC14.33□□□□□ -0.11
Ighv1-42A0A0A6YY38 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-42A0A0A6YY38 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-42A0A0A6YY38 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.33□□□□□ -0.11
Ighv1-42A0A0A6YY38 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-42A0A0A6YY38 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ighv1-42A0A0A6YY38 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-42A0A0A6YY38 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-42A0A0A6YY38 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-42A0A0A6YY38 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-42A0A0A6YY38 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Gm45747-201ENSMUST00000212203 999 ntBASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-42A0A0A6YY38 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Gm15427-201ENSMUST00000117288 531 ntBASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Mir1895-201ENSMUST00000122615 79 ntBASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Gm11025-201ENSMUST00000140773 466 ntBASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Thap2-203ENSMUST00000218989 527 ntBASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-42A0A0A6YY38 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-42A0A0A6YY38 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-42A0A0A6YY38 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-42A0A0A6YY38 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ighv1-42A0A0A6YY38 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms