Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Mir6404-201ENSMUST00000183699 94 ntBASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav21-dv12A0A075B6C4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm6659-201ENSMUST00000174752 547 ntBASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav21-dv12A0A075B6C4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm6257-201ENSMUST00000163864 910 ntBASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav21-dv12A0A075B6C4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms