Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm7370-201ENSMUST00000219471 767 ntBASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav6n-6A0A075B6B2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6n-6A0A075B6B2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6n-6A0A075B6B2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm10231-201ENSMUST00000181584 441 ntBASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm10175-202ENSMUST00000208752 441 ntBASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms