Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Gm4459-201ENSMUST00000118750 468 ntBASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Gm25406-201ENSMUST00000157599 105 ntBASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Gm2651-201ENSMUST00000203560 838 ntBASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-1A0A075B644 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav13-1A0A075B644 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.08□□□□□ -0.63
Trav13-1A0A075B644 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav13-1A0A075B644 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav13-1A0A075B644 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Gm8097-201ENSMUST00000117903 829 ntBASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Gm7862-201ENSMUST00000121461 292 ntBASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Gm4535-201ENSMUST00000182274 558 ntBASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Gm10355-201ENSMUST00000097146 517 ntBASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-1A0A075B644 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm15173-201ENSMUST00000122049 433 ntBASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Mir5131-201ENSMUST00000175426 93 ntBASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-1A0A075B644 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms