Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdc45Q9Z1X9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdc45Q9Z1X9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.14■□□□□ 0.5
Cdc45Q9Z1X9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.14■□□□□ 0.49
Cdc45Q9Z1X9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Gm27459-201ENSMUST00000184860 107 ntBASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Gm17971-201ENSMUST00000190239 806 ntBASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Gm18622-201ENSMUST00000219361 595 ntBASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdc45Q9Z1X9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdc45Q9Z1X9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdc45Q9Z1X9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms