Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Skp2Q9Z0Z3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Skp2Q9Z0Z3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.21□□□□□ -0.14
Skp2Q9Z0Z3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Skp2Q9Z0Z3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Skp2Q9Z0Z3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Gm10013-201ENSMUST00000106074 672 ntBASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.19□□□□□ -0.14
Skp2Q9Z0Z3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Gm9987-201ENSMUST00000069768 567 ntBASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Skp2Q9Z0Z3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms