Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.16□□□□□ -0.46
CcsQ9WU84 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.16□□□□□ -0.46
CcsQ9WU84 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CcsQ9WU84 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CcsQ9WU84 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.16□□□□□ -0.46
CcsQ9WU84 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CcsQ9WU84 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.16□□□□□ -0.46
CcsQ9WU84 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcsQ9WU84 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CcsQ9WU84 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CcsQ9WU84 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Gm37025-201ENSMUST00000195159 829 ntBASIC12.15□□□□□ -0.46
CcsQ9WU84 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.15□□□□□ -0.46
CcsQ9WU84 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.15□□□□□ -0.46
CcsQ9WU84 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.15□□□□□ -0.46
CcsQ9WU84 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcsQ9WU84 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
CcsQ9WU84 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CcsQ9WU84 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CcsQ9WU84 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.47
CcsQ9WU84 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CcsQ9WU84 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CcsQ9WU84 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
CcsQ9WU84 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CcsQ9WU84 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
CcsQ9WU84 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CcsQ9WU84 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CcsQ9WU84 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms