Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trex2Q9R1A9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.16□□□□□ -0.3
Trex2Q9R1A9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trex2Q9R1A9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trex2Q9R1A9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trex2Q9R1A9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Trex2Q9R1A9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trex2Q9R1A9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trex2Q9R1A9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trex2Q9R1A9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms