Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d3cQ9QZS8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Gm17661-201ENSMUST00000170317 270 ntBASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d3cQ9QZS8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Sh2d3cQ9QZS8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d3cQ9QZS8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d3cQ9QZS8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d3cQ9QZS8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d3cQ9QZS8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d3cQ9QZS8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Sh2d3cQ9QZS8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.27■□□□□ 0.03
Sh2d3cQ9QZS8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sh2d3cQ9QZS8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d3cQ9QZS8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Gm7889-201ENSMUST00000185591 958 ntBASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms