Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sec61a2Q9JLR1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sec61a2Q9JLR1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 App-207ENSMUST00000227737 2827 ntBASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sec61a2Q9JLR1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms