Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Gm27741-201ENSMUST00000185060 237 ntBASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps35Q9EQH3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.6■□□□□ 0.09
Vps35Q9EQH3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm8825-201ENSMUST00000182565 998 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm4518-201ENSMUST00000182638 718 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms