Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmg20aQ9DC33 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmg20aQ9DC33 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hmg20aQ9DC33 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Hmg20aQ9DC33 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmg20aQ9DC33 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms