Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.48■□□□□ 0.87
U2af1Q9D883 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
U2af1Q9D883 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
U2af1Q9D883 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
U2af1Q9D883 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.47■□□□□ 0.87
U2af1Q9D883 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
U2af1Q9D883 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.47■□□□□ 0.87
U2af1Q9D883 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.47■□□□□ 0.87
U2af1Q9D883 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.47■□□□□ 0.87
U2af1Q9D883 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.47■□□□□ 0.87
U2af1Q9D883 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.47■□□□□ 0.87
U2af1Q9D883 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
U2af1Q9D883 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
U2af1Q9D883 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.47■□□□□ 0.87
U2af1Q9D883 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
U2af1Q9D883 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
U2af1Q9D883 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
U2af1Q9D883 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
U2af1Q9D883 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
U2af1Q9D883 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.46■□□□□ 0.87
U2af1Q9D883 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.46■□□□□ 0.87
U2af1Q9D883 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.46■□□□□ 0.87
U2af1Q9D883 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.46■□□□□ 0.87
U2af1Q9D883 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.46■□□□□ 0.87
U2af1Q9D883 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.46■□□□□ 0.87
U2af1Q9D883 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.46■□□□□ 0.87
U2af1Q9D883 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.46■□□□□ 0.87
U2af1Q9D883 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.46■□□□□ 0.87
U2af1Q9D883 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
U2af1Q9D883 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
U2af1Q9D883 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
U2af1Q9D883 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.45■□□□□ 0.86
U2af1Q9D883 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
U2af1Q9D883 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
U2af1Q9D883 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.45■□□□□ 0.86
U2af1Q9D883 Gm4899-201ENSMUST00000178708 719 ntBASIC20.45■□□□□ 0.86
U2af1Q9D883 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.45■□□□□ 0.86
U2af1Q9D883 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
U2af1Q9D883 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2af1Q9D883 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
U2af1Q9D883 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
U2af1Q9D883 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.45■□□□□ 0.86
U2af1Q9D883 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
U2af1Q9D883 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
U2af1Q9D883 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.44■□□□□ 0.86
U2af1Q9D883 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
U2af1Q9D883 Gm9682-201ENSMUST00000197505 556 ntBASIC20.44■□□□□ 0.86
U2af1Q9D883 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.44■□□□□ 0.86
U2af1Q9D883 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.44■□□□□ 0.86
U2af1Q9D883 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
U2af1Q9D883 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.44■□□□□ 0.86
U2af1Q9D883 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2af1Q9D883 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
U2af1Q9D883 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2af1Q9D883 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms