Protein–RNA interactions for Protein: Q9CSU0

Rprd1b, Regulation of nuclear pre-mRNA domain-containing protein 1B, mousemouse

Known RBP Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1bQ9CSU0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rprd1bQ9CSU0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rprd1bQ9CSU0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rprd1bQ9CSU0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rprd1bQ9CSU0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Gm15565-201ENSMUST00000118890 427 ntBASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Gm27389-201ENSMUST00000183622 195 ntBASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rprd1bQ9CSU0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rprd1bQ9CSU0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms