Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdh15Q99PJ1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Gm28631-201ENSMUST00000190740 334 ntBASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Gm45668-201ENSMUST00000211271 493 ntBASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Gm18018-201ENSMUST00000198273 408 ntBASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh15Q99PJ1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh15Q99PJ1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm29310-201ENSMUST00000185468 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21825-201ENSMUST00000185728 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm29109-201ENSMUST00000185895 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21896-201ENSMUST00000186520 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21873-201ENSMUST00000186728 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21794-201ENSMUST00000187056 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21880-201ENSMUST00000187275 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21826-201ENSMUST00000187451 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21198-201ENSMUST00000188393 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21749-201ENSMUST00000189343 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21901-201ENSMUST00000189568 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm29424-201ENSMUST00000189716 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm28599-201ENSMUST00000189838 694 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21867-201ENSMUST00000189917 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm29269-201ENSMUST00000190087 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21722-201ENSMUST00000190153 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm28423-201ENSMUST00000190701 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21899-201ENSMUST00000190745 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21910-201ENSMUST00000191163 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21849-201ENSMUST00000191571 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm28678-201ENSMUST00000191593 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm20910-201ENSMUST00000193268 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm21871-201ENSMUST00000194621 696 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdh15Q99PJ1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Gm18062-201ENSMUST00000208020 547 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms