Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Gm8318-201ENSMUST00000182954 872 ntBASIC18.26■□□□□ 0.51
Hps4Q99KG7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps4Q99KG7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hps4Q99KG7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.25■□□□□ 0.51
Hps4Q99KG7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hps4Q99KG7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Gm27301-201ENSMUST00000184012 127 ntBASIC18.24■□□□□ 0.51
Hps4Q99KG7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.24■□□□□ 0.51
Hps4Q99KG7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.24■□□□□ 0.51
Hps4Q99KG7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hps4Q99KG7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.23■□□□□ 0.51
Hps4Q99KG7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hps4Q99KG7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.23■□□□□ 0.51
Hps4Q99KG7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.22■□□□□ 0.51
Hps4Q99KG7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Gm15427-201ENSMUST00000117288 531 ntBASIC18.22■□□□□ 0.51
Hps4Q99KG7 Gm14722-201ENSMUST00000118943 689 ntBASIC18.22■□□□□ 0.51
Hps4Q99KG7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.22■□□□□ 0.51
Hps4Q99KG7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hps4Q99KG7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms