Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.93■□□□□ 0.46
Rfc4Q99J62 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfc4Q99J62 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.92■□□□□ 0.46
Rfc4Q99J62 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Gm11745-201ENSMUST00000121669 448 ntBASIC17.92■□□□□ 0.46
Rfc4Q99J62 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
Rfc4Q99J62 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Thap2-203ENSMUST00000218989 527 ntBASIC17.92■□□□□ 0.46
Rfc4Q99J62 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfc4Q99J62 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Gm27321-201ENSMUST00000185021 205 ntBASIC17.91■□□□□ 0.46
Rfc4Q99J62 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.91■□□□□ 0.46
Rfc4Q99J62 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.91■□□□□ 0.46
Rfc4Q99J62 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfc4Q99J62 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.9■□□□□ 0.46
Rfc4Q99J62 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Mir6990-201ENSMUST00000183724 91 ntBASIC17.9■□□□□ 0.46
Rfc4Q99J62 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfc4Q99J62 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rfc4Q99J62 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rfc4Q99J62 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rfc4Q99J62 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms