Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Gm13884-201ENSMUST00000118103 829 ntBASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Gm18195-201ENSMUST00000207604 706 ntBASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha3Q91Y16 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Gm6376-201ENSMUST00000209407 580 ntBASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha3Q91Y16 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha3Q91Y16 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha3Q91Y16 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha3Q91Y16 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.27■□□□□ 0.19
Pcdha3Q91Y16 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha3Q91Y16 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.27■□□□□ 0.19
Pcdha3Q91Y16 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha3Q91Y16 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha3Q91Y16 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Gm7461-201ENSMUST00000058918 827 ntBASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha3Q91Y16 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm8097-201ENSMUST00000117903 829 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.25■□□□□ 0.19
Pcdha3Q91Y16 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms