Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha8Q91Y12 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha8Q91Y12 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha8Q91Y12 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha8Q91Y12 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Pcdha8Q91Y12 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Gm15165-201ENSMUST00000118140 502 ntBASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Gm17807-201ENSMUST00000186869 298 ntBASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha8Q91Y12 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Gm15372-201ENSMUST00000120729 834 ntBASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Gm7367-201ENSMUST00000057611 492 ntBASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha8Q91Y12 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha8Q91Y12 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha8Q91Y12 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha8Q91Y12 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha8Q91Y12 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms