Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb1Q91Y08 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb1Q91Y08 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb1Q91Y08 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb1Q91Y08 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb1Q91Y08 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
Pcdhb1Q91Y08 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb1Q91Y08 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb1Q91Y08 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Gm14722-201ENSMUST00000118943 689 ntBASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb1Q91Y08 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Gm8097-201ENSMUST00000117903 829 ntBASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Gm28033-201ENSMUST00000184224 96 ntBASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb1Q91Y08 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb1Q91Y08 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms