Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Gm18195-201ENSMUST00000207604 706 ntBASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb22Q91XZ8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Gm15173-201ENSMUST00000122049 433 ntBASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Gm5682-201ENSMUST00000173402 505 ntBASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Gm6550-201ENSMUST00000187574 993 ntBASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb22Q91XZ8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb22Q91XZ8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Gm11764-201ENSMUST00000120221 623 ntBASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pcdhb22Q91XZ8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb22Q91XZ8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb22Q91XZ8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb22Q91XZ8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms