Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhga9Q91XX9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Gm8097-201ENSMUST00000117903 829 ntBASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Gm8344-201ENSMUST00000119813 856 ntBASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga9Q91XX9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Gm19164-201ENSMUST00000210667 640 ntBASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Gm10060-201ENSMUST00000212002 111 ntBASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Gm5867-201ENSMUST00000063197 592 ntBASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhga9Q91XX9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 App-207ENSMUST00000227737 2827 ntBASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhga9Q91XX9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms