Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.08■□□□□ 0.17
Ddx1Q91VR5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Ddx1Q91VR5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx1Q91VR5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Ddx1Q91VR5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx1Q91VR5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Gm14057-201ENSMUST00000120631 482 ntBASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ddx1Q91VR5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Gm7506-201ENSMUST00000207758 815 ntBASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx1Q91VR5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44357-201ENSMUST00000195897 142 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm19658-201ENSMUST00000196231 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44367-201ENSMUST00000196836 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44350-201ENSMUST00000197197 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44390-201ENSMUST00000197533 144 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44313-201ENSMUST00000198018 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44486-201ENSMUST00000198508 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44314-201ENSMUST00000199263 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44394-201ENSMUST00000199558 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44484-201ENSMUST00000199873 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44466-201ENSMUST00000200264 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm44359-201ENSMUST00000200671 138 ntBASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Ddx1Q91VR5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms