Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.38■□□□□ 0.53
StrcQ8VIM6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.38■□□□□ 0.53
StrcQ8VIM6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.38■□□□□ 0.53
StrcQ8VIM6 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.38■□□□□ 0.53
StrcQ8VIM6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.38■□□□□ 0.53
StrcQ8VIM6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.38■□□□□ 0.53
StrcQ8VIM6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
StrcQ8VIM6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.37■□□□□ 0.53
StrcQ8VIM6 Gm5566-201ENSMUST00000116118 459 ntBASIC18.37■□□□□ 0.53
StrcQ8VIM6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.37■□□□□ 0.53
StrcQ8VIM6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
StrcQ8VIM6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.36■□□□□ 0.53
StrcQ8VIM6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.36■□□□□ 0.53
StrcQ8VIM6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
StrcQ8VIM6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.35■□□□□ 0.53
StrcQ8VIM6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
StrcQ8VIM6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Gm45668-201ENSMUST00000211271 493 ntBASIC18.35■□□□□ 0.53
StrcQ8VIM6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
StrcQ8VIM6 Gm9899-201ENSMUST00000065519 555 ntBASIC18.35■□□□□ 0.53
StrcQ8VIM6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
StrcQ8VIM6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.33■□□□□ 0.53
StrcQ8VIM6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.33■□□□□ 0.53
StrcQ8VIM6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.33■□□□□ 0.53
StrcQ8VIM6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
StrcQ8VIM6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
StrcQ8VIM6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
StrcQ8VIM6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
StrcQ8VIM6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.33■□□□□ 0.52
StrcQ8VIM6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
StrcQ8VIM6 Gm18018-201ENSMUST00000198273 408 ntBASIC18.33■□□□□ 0.52
StrcQ8VIM6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
StrcQ8VIM6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms