Protein–RNA interactions for Protein: Q8VEJ4

Nle1, Notchless protein homolog 1, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nle1Q8VEJ4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nle1Q8VEJ4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nle1Q8VEJ4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nle1Q8VEJ4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.12■□□□□ 0.17
Nle1Q8VEJ4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nle1Q8VEJ4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nle1Q8VEJ4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Nle1Q8VEJ4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Gm5264-201ENSMUST00000190584 848 ntBASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nle1Q8VEJ4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Gm14722-201ENSMUST00000118943 689 ntBASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nle1Q8VEJ4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Gm27300-201ENSMUST00000184085 97 ntBASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Gm27335-201ENSMUST00000184758 97 ntBASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nle1Q8VEJ4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nle1Q8VEJ4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nle1Q8VEJ4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nle1Q8VEJ4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nle1Q8VEJ4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nle1Q8VEJ4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nle1Q8VEJ4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nle1Q8VEJ4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms