Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps39Q8R5L3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps39Q8R5L3 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps39Q8R5L3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Mir3081-201ENSMUST00000175305 84 ntBASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.62■□□□□ 0.09
Vps39Q8R5L3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps39Q8R5L3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Vps39Q8R5L3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms