Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Gm19164-201ENSMUST00000210667 640 ntBASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Top1mtQ8R4U6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Gm8097-201ENSMUST00000117903 829 ntBASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Top1mtQ8R4U6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Top1mtQ8R4U6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Top1mtQ8R4U6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Top1mtQ8R4U6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Top1mtQ8R4U6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Gm8344-201ENSMUST00000119813 856 ntBASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Top1mtQ8R4U6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Top1mtQ8R4U6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms